# How To Clear Uncommitted Changes With Git

The following command will revert all local uncommitted changes with git:

git checkout .

# Semantic Versioning 2.0.0

## Summary

Given a version number MAJOR.MINOR.PATCH, increment the:

1. MAJOR version when you make incompatible API changes,
2. MINOR version when you add functionality in a backwards-compatiblemanner
3. PATCH version when you make backwards-compatible bug fixes.

Additional labels for pre-release and build metadata are available as extensions to the MAJOR.MINOR.PATCH format.

## Introduction

In the world of software management there exists a dread place called “dependency hell.” The bigger your system grows and the more packages you integrate into your software, the more likely you are to find yourself, one day, in this pit of despair.

In systems with many dependencies, releasing new package versions can quickly become a nightmare. If the dependency specifications are too tight, you are in danger of version lock (the inability to upgrade a package without having to release new versions of every dependent package). If dependencies are specified too loosely, you will inevitably be bitten by version promiscuity (assuming compatibility with more future versions than is reasonable). Dependency hell is where you are when version lock and/or version promiscuity prevent you from easily and safely moving your project forward.

As a solution to this problem, I propose a simple set of rules and requirements that dictate how version numbers are assigned and incremented. These rules are based on but not necessarily limited to pre-existing widespread common practices in use in both closed and open-source software. For this system to work, you first need to declare a public API. This may consist of documentation or be enforced by the code itself. Regardless, it is important that this API be clear and precise. Once you identify your public API, you communicate changes to it with specific increments to your version number. Consider a version format of X.Y.Z (Major.Minor.Patch). Bug fixes not affecting the API increment the patch version, backwards compatible API additions/changes increment the minor version, and backwards incompatible API changes increment the major version.

I call this system “Semantic Versioning.” Under this scheme, version numbers and the way they change convey meaning about the underlying code and what has been modified from one version to the next.

## Semantic Versioning Specification (SemVer)

The key words “MUST”, “MUST NOT”, “REQUIRED”, “SHALL”, “SHALL NOT”, “SHOULD”,
“SHOULD NOT”, “RECOMMENDED”, “MAY”, and “OPTIONAL” in this document are to be
interpreted as described in RFC 2119.

1. Software using Semantic Versioning MUST declare a public API. This API could be declared in the code itself or exist strictly in documentation. However it is done, it should be precise and comprehensive.
2. A normal version number MUST take the form X.Y.Z where X, Y, and Z are non-negative integers, and MUST NOT contain leading zeroes. X is the
major version, Y is the minor version, and Z is the patch version. Each element MUST increase numerically. For instance: 1.9.0 -> 1.10.0 -> 1.11.0.
3. Once a versioned package has been released, the contents of that version MUST NOT be modified. Any modifications MUST be released as a new version.
4. Major version zero (0.y.z) is for initial development. Anything may change at any time. The public API should not be considered stable.
5. Version 1.0.0 defines the public API. The way in which the version number is incremented after this release is dependent on this public API and how it changes.
6. Patch version Z (x.y.Z | x > 0) MUST be incremented if only backwards compatible bug fixes are introduced. A bug fix is defined as an internal change that fixes incorrect behavior.
7. Minor version Y (x.Y.z | x > 0) MUST be incremented if new, backwards compatible functionality is introduced to the public API. It MUST be incremented if any public API functionality is marked as deprecated. It MAY be incremented if substantial new functionality or improvements are introduced within the private code. It MAY include patch level changes. Patch version MUST be reset to 0 when minor version is incremented.
8. Major version X (X.y.z | X > 0) MUST be incremented if any backwards incompatible changes are introduced to the public API. It MAY include minor and patch level changes. Patch and minor version MUST be reset to 0 when major version is incremented.
9. A pre-release version MAY be denoted by appending a hyphen and a series of dot separated identifiers immediately following the patch version. Identifiers MUST comprise only ASCII alphanumerics and hyphen [0-9A-Za-z-]. Identifiers MUST NOT be empty. Numeric identifiers MUST NOT include leading zeroes. Pre-release versions have a lower precedence than the associated normal version. A pre-release version indicates that the version is unstable and might not satisfy the intended compatibility requirements as denoted by its associated
normal version. Examples: 1.0.0-alpha, 1.0.0-alpha.1, 1.0.0-0.3.7, 1.0.0-x.7.z.92.
10. Build metadata MAY be denoted by appending a plus sign and a series of dot separated identifiers immediately following the patch or pre-release version. Identifiers MUST comprise only ASCII alphanumerics and hyphen [0-9A-Za-z-]. Identifiers MUST NOT be empty. Build metadata SHOULD be ignored when determining version precedence. Thus two versions that differ only in the build metadata, have the same precedence. Examples: 1.0.0-alpha+001, 1.0.0+20130313144700, 1.0.0-beta+exp.sha.5114f85.
11. Precedence refers to how versions are compared to each other when ordered. Precedence MUST be calculated by separating the version into major, minor, patch and pre-release identifiers in that order (Build metadata does not figure into precedence). Precedence is determined by the first difference when comparing each of these identifiers from left to right as follows: Major, minor,
and patch versions are always compared numerically. Example: 1.0.0 < 2.0.0 <2.1.0 < 2.1.1. When major, minor, and patch are equal, a pre-release version has lower precedence than a normal version. Example: 1.0.0-alpha < 1.0.0. Precedence for two pre-release versions with the same major, minor, and patch version MUST be determined by comparing each dot separated identifier from left to right until a difference is found as follows: identifiers consisting of only digits are compared numerically and identifiers with letters or hyphens are compared lexically in ASCII sort order. Numeric identifiers always have lower precedence than non-numeric identifiers. A larger set of pre-release fields has a higher precedence than a smaller set, if all of the preceding identifiers are equal.
Example: 1.0.0-alpha < 1.0.0-alpha.1 < 1.0.0-alpha.beta < 1.0.0-beta <1.0.0-beta.2 < 1.0.0-beta.11 < 1.0.0-rc.1 < 1.0.0.

## Why Use Semantic Versioning?

This is not a new or revolutionary idea. In fact, you probably do something close to this already. The problem is that “close” isn’t good enough. Without compliance to some sort of formal specification, version numbers are essentially useless for dependency management. By giving a name and clear definition to the above ideas, it becomes easy to communicate your intentions to the users of your software. Once these intentions are clear, flexible (but not too flexible) dependency specifications can finally be made.

A simple example will demonstrate how Semantic Versioning can make dependency hell a thing of the past. Consider a library called “Firetruck.” It requires a Semantically Versioned package named “Ladder.” At the time that Firetruck is created, Ladder is at version 3.1.0. Since Firetruck uses some functionality that was first introduced in 3.1.0, you can safely specify the Ladder dependency as greater than or equal to 3.1.0 but less than 4.0.0. Now, when Ladder version 3.1.1 and 3.2.0 become available, you can release them to your package management system and know that they will be compatible with existing dependent software.

As a responsible developer you will, of course, want to verify that any package upgrades function as advertised. The real world is a messy place;
there’s nothing we can do about that but be vigilant. What you can do is let Semantic Versioning provide you with a sane way to release and upgrade
packages without having to roll new versions of dependent packages, saving you time and hassle.

If all of this sounds desirable, all you need to do to start using Semantic Versioning is to declare that you are doing so and then follow the rules. Link
to this website from your README so others know the rules and can benefit from them.

Creative Commons – CC BY 3.0

# Plots with FFTW Benchmark

## Timing

Make FFT timing measurement is intended to reflect the common case where many  FFTs of the same size, indeed of the same array, are require. Thus, break the measurement into two parts:

### Part One: Initialization Set Up Time

1. Call separate initialization/setup routines provided by the code. This step may include calling the code’s FFT once, if it performs initialization on the first call
2. Measure the setup time as a rough indicator
3. Perform repeated measurements to try and optimise the setup time

### Part Two: Plotting Performance Time

#### Plot the “mflops” of each FFT

The mflops is a scaled version of the performance speed

##### Complex Transform mflops Plots
mflops = 5 N log2(N) / (time for one FFT in microseconds)
##### Real Transform mflops Plots
mflops = 2.5 N log2(N) / (time for one FFT in microseconds)

Where N is number of data points (the product of the FFT dimensions).

This is not an actual flop count; it is simply a convenient scaling, based on the fact that the radix-2 Cooley-Tukey algorithm asymptotically requires 5 N log2(N) floating-point operations. It allows us to compare the performance for many different sizes on the same graph, get a sense of the cache effects, and provide a rough measure of “efficiency” relative to the clock speed.

Plot either the forward or the backward transform speed, whichever is faster “on average” and in order to keep the graphs readable, plot the direction with the “fastest” results.

### Plot Rank

To quantify the “average” speed of a FFT routine, and also to reorder the plot legend for improved readability, we define a plot rank for each FFT as follows. First, for each transform size in a plot, compute:

rank = (mflops for FFT) / (mflops for astest FFT for that size).

The plot rank of a given FFT is defined as the median of its ranks for all sizes in the plot. Note: The plot rank should not be interpreted as an absolute measure of performance.

### Raw data files

In the raw benchmark data output, the speed for all routines, for
both forward and backward transforms, is collected in the file host.speed in the space-delimited format:

name-of-code transform-type transform-size mflops time setup-time

where the times are in seconds.

transform-type is a four-character string consisting of precision (double/single = d/s), type (complex/real = c/r), in-place/out-of-place(= i/o), and forward/backward (=f/b). For example, transform-type = dcif denotes a double-precision in-place forward transform of complex data.

# Dimensional Analysis

### Motivation

A minor error in algebra can be detected because it will often result in an equation which is dimensionally incorrect. Therefore dimensional analysis is used to checking the correctness of a derived equation. Most physical quantities can be expressed in terms of combinations of five basic dimensions:

Mass (M)

Length (L)

Time (T)

Electrical current (I)

Temperature [$$]\Phi[\$$]

These five dimensions have been chosen as being basic because they are easy to measure in experiments.

### Example One

The dimensions of speed are length divided by time, or simply L/T.

### Example Two

The dimensions of area are L × L=L2 since area can always be calculated as a length times a length.

# Set a Terminal Prompt To Display Current Git Branch in ~/.bashrc

It is easy to mistake which branch is the current branch just by using

git branch


Or even:

git rev-parse --abbrev-ref HEAD


To get round this the best way is to set PS1 to show the currently active git branch at the command line. To indicate the current branch the code can be added to ~/.bashrc in unix based systems then when a new session is run and the current working directory (CWD) is a git repository, whichever is the active branch gets clearly stated in a terminal prompt.

The code solution for the following ~/.bashrc script, has been provided by git ninja, Colin Fuller:

function parse_git_branch {
git branch --no-color 2> /dev/null | sed -e '/^[^*]/d' -e "s/* $$.*$$/ $$\1$$/"
}
export PS1='\u@\h \w$\033[0;32m$$(parse_git_branch)$\033[0m$$ '


This is added to ~/.bashrc by running the following command and pasting the code into the file directly

vi ~/.bashrc


It is possible to see the change on opening a new terminal or by running the following:

source ~/.bashrc